টেমপ্লেট:তথ্যছক জিন
 | এই টেমপ্লেটটি অধিক পাতায় ব্যবহৃত হয়েছে ,ফলে এর যে কোন পরিবর্তন ব্যাপকভাবে দেখা যাবে। দয়া করে যে কোন ধরনের পরিবর্তন টেমপ্লেটটির /খেলাঘর বা /পরীক্ষা উপপাতা অথবা আপনার ব্যবহারকারী উপপাতায় পরীক্ষা করুন। বাস্তবায়নের পূর্বে আলাপ পাতায় পরিবর্তন সম্পর্কে আলোচনা করুন। |
 | ব্যবহৃত লুয়া: |
এটি একটি তথ্যছক জিন টেমপ্লেট। তথ্যছকের উপাত্তগুলো আসবে উইকিউপাত্ত থেকে। এই টেমপ্লেটের লুয়া কোডের ব্যবহার হয়েছে মডিউল:Infobox gene-এ।
কোনো জিন পাতায় ব্যবহার
সম্পাদনাজিন পাতার শুরুতে {{তথ্যছক জিন}} বসিয়ে দিন। The infobox is populated via the Wikidata item of the page it resides on. To view which Wikidata item is linked to a page, follow the "Wikidata items" link from the "Tools" menu to the left of the article.
কোনো প্রোটিন পাতায় ব্যবহার
সম্পাদনাপ্রোটিন পাতার শুরুতে {{তথ্যছক জিন}} বসিয়ে দিন। The infobox is populated by using the Wikidata item of the protein to find the encoded gene item and then uses the gene item to populate the infobox.
অন্যান্য পাতায় ব্যবহার
সম্পাদনাAny page can display the infobox even if it does not have a gene or protein interwiki link. The Wikidata item must be explicitly added as a parameter and the underlying module is invoked. For instance, appending
{{#invoke:Infobox_gene|getTemplateData|QID=Q414043}} to the top of any page will create an infobox for the gene RELN. QID is the Wikidata gene item used to populate the infobox. Substitute the wikidata item id (QID) of interest as the QID parameter.
ত্রুটিবার্তা
সম্পাদনা"An Error has occurred retrieving Wikidata item for infobox" Indicates a non gene/protein Wikidata item or an incomplete Wikidata item.
বিষয়শ্রেণী
সম্পাদনাIncluding this template will automatically result in the addition of relevant categories based on the properties of the gene. These include Category:Human proteins and categories that correspond to the chromosome where the gene is located, such as Category:Genes on human chromosome 19. Other categories added manually to the article apart from the template will work as usual.
উপাত্ত কাঠামো
সম্পাদনা
Data structure of gene and protein data in Wikidata is a bit complex. Even if there is only one gene/protein article in Wikipedia, there are many data pages in Wikidata.
Basically Wikidata has distinct pages for gene and protein each, for respective species (See the table below). And pages are interconnected based on following rules.
- Wikipedia articles are connected to Wikidata's gene data page (#Case A) or protein data page (#Case B) through d:Help:Sitelinks. In most cases, articles are connected to gene data page.
- Gene and protein pages are interconnected through "encodes (d:P:P688)" and "encoded by (d:P:P702)" property claims (horizontal arrows "→", "←" in the table).
- Gene pages from different species are interconnected through "ortholog (d:P:P684)" property claims (vertical arrows "↑", "↓" in the table).
The data which infobox_gene shows to readers are collected from somewhere of this interconnected Wikidata pages.
Case A
সম্পাদনাIn most cases, Wikipedia article page is connected to Human gene data page. For example, Sonic hedgehog.
| Wikipedia (Article) |
Wikidata (Gene) |
Wikidata (Protein) | |||
| Human | Wikipedia article page Sonic hedgehog |
→d:Help:Sitelinks→ ←d:Help:Sitelinks← |
Human gene data page SHH (d:Q14860072) |
→encodes (d:P:P688)→ ←encoded by (d:P:P702)← |
Human protein data page Sonic hedgehog (d:Q2477760) |
| ↑ ↓ ortholog (d:P:P684) ↑ ↓ |
|||||
| Mouse | Mouse gene data page Shh (d:Q14860079) |
→encodes (d:P:P688)→ ←encoded by (d:P:P702)← |
Mouse protein data page Sonic hedgehog (d:Q14860215) | ||
| ↑ ↓ ortholog (d:P:P684) ↑ ↓ |
|||||
| ⋮ | ⋮ | ⋮ |
Case B
সম্পাদনাIn some cases, Wikipedia article page is connected to Human protein data page. For example, Reelin.
| Wikidata (Gene) |
Wikidata (Protein) |
Wikipedia (Article) | |||
| Human | Human gene data page RELN (d:Q414043) |
→encodes (d:P:P688)→ ←encoded by (d:P:P702)← |
Human protein data page Reelin (d:Q13561329) |
→d:Help:Sitelinks→ ←d:Help:Sitelinks← |
Wikipedia article page Reelin |
| ↑ ↓ ortholog (d:P:P684) ↑ ↓ |
|||||
| Mouse | Mouse gene data page Reln (d:Q14331135) |
→encodes (d:P:P688)→ ←encoded by (d:P:P702)← |
Mouse protein data page Reelin (d:Q14331165) |
||
| ↑ ↓ ortholog (d:P:P684) ↑ ↓ |
|||||
| ⋮ | ⋮ | ⋮ |
উপাত্তের অবস্থান
সম্পাদনাThe followings are list of data which are used in this template. Showing data example and data location in the case of Sonic hedgehog.
| Data | Wikidata property |
Data example | Data location | Other | |||
|---|---|---|---|---|---|---|---|
| Human Gene Page |
Human Protein Page |
Mouse Gene Page |
Mouse Protein Page | ||||
| Q14860072 | Q2477760 | Q14860079 | Q14860215 | ||||
| Gene name | Label | ● | ● | ||||
| Aliases | Aliases | ● | ● | ||||
| HGNC gene symbol | P353 | ● | |||||
| Entrez Gene ID | P351 | ● | ● | ||||
| Image | P18 | ● | |||||
| Ensembl Gene ID | P594 | ● | ● | ||||
| UniProt ID | P352 | ● | ● | ||||
| EC number | P591 | ● | ● | ||||
| OMIM ID | P492 | ● | |||||
| MGI ID | P671 | ● | |||||
| HomoloGene ID | P593 | ● | ● | ||||
| PDB id | P638 | ● | ● | ||||
| Gene Atlas Image | P692 | ● | |||||
| Gene ontology | P680 P681 P682 |
● | ● | ||||
| RefSeq RNA ID | P639 | ● | ● | ||||
| RefSeq Protein ID | P637 | ● | ● | ||||
| Ensembl Transcript ID | P704 | ● | ● | ||||
| Chromosome | P1057 | ● | ● | ||||
| Chromosome number | P1813 | ● | |||||
| Chromosome length | P2043 | ● | |||||
| Chromosome category | P910 | ● | |||||
| Cytogenetic location | P4196 | ● | ● | ||||
| Genomic start | P644 | ● | ● | ||||
| Genomic end | P645 | ● | ● | ||||
| Strand orientation | P2548 | ● | ● | ||||
এরকম অন্যান্য টেমপ্লেট
সম্পাদনা- Template:Infobox protein
- Template:Infobox enzyme
- Template:Infobox protein family
- Template:Infobox nonhuman protein
- Template:GNF Protein box - historical
আরও দেখুন
সম্পাদনা- d:User:ProteinBoxBot - Enormous biomedical data in Wikidata are mostly posted and maintained by this bot
- Wikipedia:Gene Wiki
বহি সংযোগ
সম্পাদনা- BioGPS, a site that allows for automated stub creation for human gene pages using this template
- Huss, Jon W; Orozco, Camilo; Goodale, James; Wu, Chunlei; Batalov, Serge; Vickers, Tim J; Valafar, Faramarz; Su, Andrew I (৮ জুলাই ২০০৮)। "A Gene Wiki for Community Annotation of Gene Function"। PLoS Biology। 6 (7): e175। ডিওআই:10.1371/journal.pbio.0060175
। পিএমআইডি 18613750।
